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1.
Exp Parasitol ; 255: 108652, 2023 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-37939822

RESUMO

Louse flies (Diptera: Hippoboscidae) are obligatory hematophagous ectoparasites of birds and mammals. These widely distributed parasitic flies may have a significant impact on wild and farm animals by feeding on their blood and transmitting bloodborne pathogens. However, despite their ecological importance, louse flies are clearly underrepresented in host-parasite research and implementation of genetic approaches in this group is generally hampered by lacking molecular tools. In addition, louse flies that parasitize long-distance migrants can travel long distances with their avian hosts, facilitating the large-scale spread of pathogens across landscapes and geographic regions. Given the wide diversity of louse flies that parasitize a variety of avian hosts, their direct negative impact on host survival, and their high potential to transmit bloodborne pathogens even along avian migration routes, it is surprising that our knowledge of louse fly ecology is rather modest and incomplete. Here, we aimed to develop a novel molecular tool for polyxenous avian louse flies from the genus Ornithomya, which are among the most common and widely distributed representatives of Hippoboscidae family, to improve research of their genetic population structure and molecular ecology. Using the Illumina Mi-seq sequencing, we conducted a genome-wide scan in Ornithomya avicularia to identify putative microsatellite markers. A panel of 26 markers was selected to develop amplification protocols and assess polymorphism in the Central European population of O. avicularia, as well as to test for cross-amplification in a congeneric species (O. chloropus). A genome-scan in O. avicularia identified over 12 thousand putative microsatellite markers. Among 26 markers selected for a population-wide screening; one did not amplify successfully and three were monomorphic. 22 markers were polymorphic with at least two alleles detected. Two markers showed presence of null alleles. A cross-amplification of microsatellite markers in O. chloropus revealed allelic polymorphism at 14 loci, with the mean allelic richness of 3.78 alleles per locus (range: 2-8). Our genome-wide scan in O. avicularia provides a novel and powerful tool for molecular research in Ornithomya louse flies. Our panel of polymorphic microsatellite loci should allow genotyping of louse flies from geographically distinct populations and from a wide spectrum of avian hosts, enhancing population genetic and phylogeographic research in Ornithomya.


Assuntos
Dípteros , Ftirápteros , Animais , Dípteros/parasitologia , Ftirápteros/genética , Aves/genética , Genética Populacional , Polimorfismo Genético , Repetições de Microssatélites , Mamíferos/genética
2.
Sci Rep ; 12(1): 15228, 2022 09 08.
Artigo em Inglês | MEDLINE | ID: mdl-36075938

RESUMO

Mayflies (Ephemeroptera) are among the oldest pterygote insects, with the earliest fossils dating back to the Late Carboniferous. Within mayflies, Leptophlebiidae are a highly diverse and widespread group, with approximately 140 genera and 640 species. Whereas taxonomy, systematics, and phylogeny of extant Leptophlebiidae are in the focus of extensive studies, little is known about leptophlebiid fossil taxa. Because fossil remains of Ephemeroptera in sedimentary rocks are relatively rare, inclusions of mayflies in amber are a unique source of information on their evolution and diversity in the past. Leptophlebiidae found in Cenozoic resins mostly belong to the subfamilies Leptophlebiinae (in Eocene Baltic amber) and Atalophlebiinae (in Miocene Dominican and Mexican ambers). In the present contribution, we confirm the first finding of the genus Calliarcys from Eocene Baltic amber by using Micro-CT, which allowed confirming its generic placement by visualizing diagnostic key characters otherwise hidden by a cloud of turbidity. Additionally, we present first molecular data on the extant species Calliarcys humilis Eaton, 1881 from the Iberian Peninsula and the barcode gap analysis for Leptophlebiinae and Habrophlebiinae.


Assuntos
Âmbar , Ephemeroptera , Animais , Código de Barras de DNA Taxonômico , Fósseis , Insetos , Microtomografia por Raio-X
3.
Sci Total Environ ; 850: 157959, 2022 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-35964758

RESUMO

AIMS: The present study is the first-ever attempt to generate information on the potential present and future distribution of Impatiens capensis (orange balsam) under various climate change scenarios. Moreover, the differences in bioclimatic preferences of native and non-native populations were evaluated. LOCATION: Global. TAXON: Angiosperms. METHODS: A database of I. capensis localities was compiled based on the public database - the Global Biodiversity Information Facility (GBIF), herbarium specimens, and a field survey in Poland. The initial dataset was verified, and each record was assigned to one of two groups - native (3664 records from North America) or non-native (750 records from Europe and the western part of North America). The analyses involved bioclimatic variables in 2.5 arc-minutes of interpolated climate surface downloaded from WorldClim v. 2.1. MaxEnt version 3.3.2 was used to conduct the ecological niche modeling based on presence-only observations of I. capensis. Forecasts of the future distribution of the climatic niches of the studied species in 2080-2100 were made based on climate projections developed by the CNRM/CERFACS modeling and Model for Interdisciplinary Research on Climate (MIROC-6). MAIN CONCLUSIONS: Distribution models created for "present time" showed slightly broader potential geographical ranges of both native and invasive populations of orange balsam. On the other hand, some areas (e.g. NW Poland, SW Finland), settled by the species, are far outside the modeled climate niche, which indicates a much greater adaptation potential of I. capensis. In addition, the models have shown that climate change will shift the native range of orange balsam to the north and the range of its European populations to the northwest. Moreover, while the coverage of niches suitable for I. capensis in America will extend due to climate change, the European populations will face 31-95 % habitat loss.


Assuntos
Mudança Climática , Impatiens , Bálsamos , Biodiversidade , Ecossistema
4.
Sci Rep ; 12(1): 11332, 2022 07 05.
Artigo em Inglês | MEDLINE | ID: mdl-35790799

RESUMO

The Ponto-Caspian region is an endemicity hotspot that harbours several crustacean radiations, among which amphipods are the most diverse. These poorly known species are severely threatened in their native range, while at the same time they are invading European inland waters with significant ecological consequences. A proper taxonomic knowledge of this fauna is paramount for its conservation within the native region and monitoring outside of it. Here, we assemble a DNA barcode reference library for nearly 60% of all known Ponto-Caspian amphipod species. We use several methods to define molecular operational taxonomic units (MOTUs), based on two mitochondrial markers (COI and 16S), and assess their congruence with current species-level taxonomy based on morphology. Depending on the method, we find that 54-69% of species had congruent morpho-molecular boundaries. The cases of incongruence resulted from lumping distinct morphospecies into a single MOTU (7-27%), splitting a morphospecies into several MOTUs (4-28%), or both (4-11%). MOTUs defined by distance-based methods without a priori divergence thresholds showed the highest congruence with morphological taxonomy. These results indicate that DNA barcoding is valuable for clarifying the diversity of Ponto-Caspian amphipods, but reveals that extensive work is needed to resolve taxonomic uncertainties. Our study advances the DNA barcode reference library for the European aquatic biota, paving the way towards improved taxonomic knowledge needed to enhance monitoring and conservation efforts.


Assuntos
Anfípodes , Borboletas , Anfípodes/genética , Animais , DNA , Código de Barras de DNA Taxonômico/métodos , Biblioteca Gênica
5.
PhytoKeys ; 206: 87-107, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-36761269

RESUMO

This study presents the results of investigation of the micromorphology and variability of Sisymbriumpolymorphum seeds collected in 49 localities in the core range and isolated populations of Central Europe, Eastern Europe and Central Asia. In addition, we compared the ultrastructure of the seeds of S. polymorphum with that of the closely-related species S.loeselii and S.linifolium. The seeds were measured with a stereoscopic microscope and a biometric programme (ImageJ) and micromorphological studies were performed by scanning electron microscopy (SEM). The seed variability showed intraspecific stability of the ultrastructure and low variability of metric features within the studied range. Studied species showed differences in the ultrastructure, which will be valuable for diagnostic purposes. We present and describe, for the first time, the ultrastructure of S.polymorphum seeds.

6.
Cells ; 10(12)2021 12 04.
Artigo em Inglês | MEDLINE | ID: mdl-34943925

RESUMO

The importance of aquaporins (AQPs) in the transport of water and solutes through cell membranes is well recognized despite being relatively new. To date, despite their abundance, diversity, and presence in disparate environments, amphipods have only been mentioned in studies about the AQPs of other animals and have never been further investigated. In this work, we aimed to recover from public data available AQPs of these crustaceans and reconstruct phylogenetic affinities. We first performed BLAST searches with several queries of diverse taxa against different NCBI databases. Then, we selected the clades of AQPs retrieving the amphipod superfamily Gammaroidea as monophyletic and ran phylogenetic analyses to assess their performances. Our results show how most of the AQPs of amphipods are similar to those of other crustaceans, despite the Prip-like displayed different paralogs, and report for the first time a putative Aqp8-like for arthropods. We also found that the candidate genes of Prip-like, Bib-like, Aqp12-like, and Glp-like help solve deeper relationships in phylogenies of amphipods while leaving uncertainties in shallower parts. With our findings, we hope to increase attention to the study of amphipods as models for AQP functioning and evolution.


Assuntos
Anfípodes/metabolismo , Aquaporinas/metabolismo , Motivos de Aminoácidos , Sequência de Aminoácidos , Animais , Aquaporinas/química , Sequência Conservada , Humanos , Funções Verossimilhança , Filogenia , Estrutura Secundária de Proteína
7.
Int J Mol Sci ; 22(19)2021 Sep 24.
Artigo em Inglês | MEDLINE | ID: mdl-34638649

RESUMO

The Ponto-Caspian region is the main donor of invasive amphipods to freshwater ecosystems, with at least 13 species successfully established in European inland waters. Dikerogammarus spp. and Pontogammarus robustoides are among the most successful, due to their strong invasive impact on local biota. However, genomic knowledge about these invaders is scarce, while phylogeography and population genetics have been based on short fragments of mitochondrial markers or nuclear microsatellites. In this study, we provide: (i) a reconstruction of six mitogenomes for four invasive gammarids (D. villosus, D. haemobaphes, D. bispinosus, and P. robustoides); (ii) a comparison between the structure of the newly obtained mitogenomes and those from the literature; (iii) SNP calling rates for individual D. villosus and D. haemobaphes from different invasion sites across Europe; and (iv) the first time-calibrated full mitogenome phylogeny reconstruction of several Ponto-Caspian taxa. We found that, in comparison to other gammarids, the mitogenomes of Ponto-Caspian species show a translocation between the tRNA-E and tRNA-R positions. Phylogenetic reconstruction using the mitogenomes identified that Ponto-Caspian gammarids form a well-supported group that originated in the Miocene. Our study supports paraphyly in the family Gammaridae. These provided mitogenomes will serve as vital genetic resources for the development of new markers for PCR-based identification methods and demographic studies.


Assuntos
Anfípodes/genética , Genoma Mitocondrial/genética , Polimorfismo de Nucleotídeo Único/genética , Animais , Ecossistema , Europa (Continente) , Marcadores Genéticos/genética , Genética Populacional/métodos , Espécies Introduzidas , Repetições de Microssatélites/genética , Filogenia , Filogeografia
8.
PeerJ ; 9: e11192, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33986985

RESUMO

BACKGROUND: Dragonflies and damselflies (Odonata) are important components in biomonitoring due to their amphibiotic lifecycle and specific habitat requirements. They are charismatic and popular insects, but can be challenging to identify despite large size and often distinct coloration, especially the immature stages. DNA-based assessment tools rely on validated DNA barcode reference libraries evaluated in a supraregional context to minimize taxonomic incongruence and identification mismatches. METHODS: This study reports on findings from the analysis of the most comprehensive DNA barcode dataset for Central European Odonata to date, with 103 out of 145 recorded European species included and publicly deposited in the Barcode of Life Data System (BOLD). The complete dataset includes 697 specimens (548 adults, 108 larvae) from 274 localities in 16 countries with a geographic emphasis on Central Europe. We used BOLD to generate sequence divergence metrics and to examine the taxonomic composition of the DNA barcode clusters within the dataset and in comparison with all data on BOLD. RESULTS: Over 88% of the species included can be readily identified using their DNA barcodes and the reference dataset provided. Considering the complete European dataset, unambiguous identification is hampered in 12 species due to weak mitochondrial differentiation and partial haplotype sharing. However, considering the known species distributions only two groups of five species possibly co-occur, leading to an unambiguous identification of more than 95% of the analysed Odonata via DNA barcoding in real applications. The cases of small interspecific genetic distances and the observed deep intraspecific variation in Cordulia aenea (Linnaeus, 1758) are discussed in detail and the corresponding taxa in the public reference database are highlighted. They should be considered in future applications of DNA barcoding and metabarcoding and represent interesting evolutionary biological questions, which call for in depth analyses of the involved taxa throughout their distribution ranges.

9.
Genome ; 64(3): 196-206, 2021 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-32502367

RESUMO

We present the results of the first-ever DNA barcoding study of odonates from the Maltese Islands. In total, 10 morphologically identified species were collected during a two-week long expedition in 2018. Eighty cytochrome c oxidase subunit I (COI) barcodes were obtained from the collected specimens. Intra- and interspecific distances ranged from 0.00% to 2.24% and 0.48% to 17.62%, respectively. Successful species identification based on ascribing a single morphological species to a single Barcode Index Number (BIN) was achieved for eight species (80%). In the case of two species, Ischnura genei and Anax parthenope, BINs were shared with other closely related species. The taxonomic status of I. genei is questionable and the phylogenetic relationship between A. imperator/parthenope is not clear. Further studies involving a series of adult specimens collected in a wide spatial range and nuclear markers are necessary to resolve these cases. Therefore, this dataset serves as an initial DNA barcode reference library for Maltese odonates, within a larger project: Aquatic Macroinvertebrates DNA Barcode Library of Malta.


Assuntos
Código de Barras de DNA Taxonômico , Odonatos/classificação , Animais , Complexo IV da Cadeia de Transporte de Elétrons/genética , Variação Genética , Malta , Odonatos/genética , Filogenia
10.
Sci Rep ; 10(1): 16536, 2020 10 06.
Artigo em Inglês | MEDLINE | ID: mdl-33024224

RESUMO

Traditional morphological diagnoses of taxonomic status remain widely used while an increasing number of studies show that one morphospecies might hide cryptic diversity, i.e. lineages with unexpectedly high molecular divergence. This hidden diversity can reach even tens of lineages, i.e. hyper cryptic diversity. Even well-studied model-organisms may exhibit overlooked cryptic diversity. Such is the case of the freshwater crustacean amphipod model taxon Gammarus fossarum. It is extensively used in both applied and basic types of research, including biodiversity assessments, ecotoxicology and evolutionary ecology. Based on COI barcodes of 4926 individuals from 498 sampling sites in 19 European countries, the present paper shows (1) hyper cryptic diversity, ranging from 84 to 152 Molecular Operational Taxonomic Units, (2) ancient diversification starting already 26 Mya in the Oligocene, and (3) high level of lineage syntopy. Even if hyper cryptic diversity was already documented in G. fossarum, the present study increases its extent fourfold, providing a first continental-scale insight into its geographical distribution and establishes several diversification hotspots, notably south-eastern and central Europe. The challenges of recording hyper cryptic diversity in the future are also discussed.


Assuntos
Anfípodes/classificação , Anfípodes/genética , Água Doce , Variação Genética , Hidrobiologia , Animais , Código de Barras de DNA Taxonômico , Ecotoxicologia , Europa (Continente) , Evolução Molecular , Ligação Genética , Filogenia
11.
Sci Rep ; 10(1): 18695, 2020 10 29.
Artigo em Inglês | MEDLINE | ID: mdl-33122728

RESUMO

Gammarus roeselii Gervais, 1835 is a morphospecies with a wide distribution range in Europe. The Balkan Peninsula is known as an area of pre-Pleistocene cryptic diversification within this taxon, resulting in at least 13 Molecular Operational Taxonomic Units (MOTUs). The morphospecies diversified there during Neogene and has probably invaded other parts of the continent very recently, in postglacial or even historical times. Thus, the detailed goals of our study were to (1) identify which lineage(s) colonized Central-Western Europe (CWE), (2) determine their possible geographical origin, (3) verify, whether the colonisation was associated with demographic changes. In total, 663 individuals were sequenced for the cytochrome oxidase I (COI) barcoding fragment and 137 individuals for the internal transcribed spacer II (ITS2). We identified two MOTUs in the study area with contrasting Barcode Index Number and haplotype diversities. The Pannonian Basin (PB) appeared to be a potential ice age refugium for the species, while CWE was colonised by a single lineage (also present in PB), displaying low genetic diversity. Our results suggest that G. roeselii is a relatively recent coloniser in CWE, starting demographic expansion around 10 kya.


Assuntos
Anfípodes/crescimento & desenvolvimento , Água Doce , Anfípodes/classificação , Anfípodes/genética , Animais , Evolução Biológica , Europa (Continente) , Haplótipos , Filogeografia , Especificidade da Espécie
12.
PeerJ ; 7: e7617, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31576236

RESUMO

BACKGROUND: Small size and large diversity of adaptations make invertebrates a group of animals which can be easily transported by different human activities. Many species can travel as "hitchhikers" with plant material (both on plant surfaces and in the soil), including plants used for decoration in vivaria. Vivaria are often tropical in nature environments, with high temperatures and humidity, suitable for invertebrates from tropical regions. Although many of such invertebrates cannot survive in temperate regions where harsh weather conditions are present, it is also known that some can successfully acclimatise. As a result, their negative impact on local flora and fauna cannot be excluded. MATERIAL AND METHODS: Terrestrial invertebrates were collected in several cities of Poland from tropical vivaria where poison dart frogs (Dendrobatidae) and/or orchids (Orchidaceae) were kept by hobbyists. Collecting of the material was preceded by a simple questionnaire placed on the biggest Polish forum devoted to poison dart frogs. Moreover, we contacted some Polish wholesalers offering tropical invertebrates (Isopoda and Collembola), used as the food source for frogs, hoping to receive information about locations where those invertebrates were delivered, over the period of one year. We obtained mtDNA barcodes using the COI marker (cytochrome c oxidase subunit I gene) for seven potential morphospecies. RESULTS: In total, 12 taxa classified as Turbellaria, Annelida, Gastropoda, Isopoda, Diplopoda, Chilopoda and Collembola were collected and preserved in pure ethanol. We collected material and/or information from 65 locations, including 56 cities to which exotic isopods and springtails were sold by wholesalers over the period of nine months (average number per month = 18 cities). We obtained 18 COI sequences which were assigned to seven BINs and thus confirmed identification of seven species. The results indicate that the number of species transported with exotic plants is not small and can be observed regularly. Species noted as "hitchhikers" on plant structures and/or as inhabitants of soil in plant pots, originally came from South and Central America, Africa, Asia and possibly from North America or Southern Europe. Three taxa were noted for the first time from Poland, including Rhynchodemus sylvaticus (Rhynchodemidae), Trichorhina sp.1 (Platharthridae), and Guppya gundlachi (Euconulidae). DISCUSSION: The presented study clearly shows that an exotic hobby such as keeping tropical poison dart frogs and/or orchids may promote fast and uncontrolled dispersion of a high number of invertebrates classified in different taxonomical groups. Plant material (green elements of plants and the soil in which they are planted) used in vivaria can be an important source of such animals.

13.
PeerJ ; 6: e5971, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30498639

RESUMO

BACKGROUND: Tiger beetles (Coleoptera: Cicindelidae) are fast running predatory insects preying on different small insects and other terrestrial arthropods. Prey is located by sight and captured after short and fast pursuit interspersed with pause-and-look behaviour. At least some tiger beetle species can recognise the size and location of prey using memory, which probably allows them to achieve greater hunting success. MATERIAL AND METHODS: Two eurytopic tiger beetle species known to occur in different types of habitat were used in the study: Cicindela hybrida hybrida, a very common central European beetle found even in artificial habitats such as sandy roads or gravel pits, and Calomera littoralis nemoralis, a species widely distributed in southern European countries and occurring on sandy sea beaches, in salt marshes, as well as on sandy banks of rivers and lakes. Both species are very similar in body size. Specimens used in the study were collected in the field and later tested in the laboratory. We checked whether tiger beetles use different hunting strategies when attacking prey of different sizes and abilities to escape as well as whether the sex of the studied species makes a difference in its hunting behaviour. RESULTS: The hunting strategies of both tiger beetle species consist of the following main phases: identification, pursuit (often with stops), attack, and optional release of the prey, and then the secondary attack, abandonment of the prey, or consumption of the prey. Considerable differences were noticed in hunting behaviour depending on the type of prey, its movement ability and escape potential. Caterpillars were attacked without pursuit, in the head or directly behind the head where a concentration of nerves and main muscles responsible for walking are located. Effective attacks on beetles were executed at the connection between the thorax and the abdomen. Calomera littoralis strongly preferred slow moving prey, while Cicindela hybrida preferred in equal measure slow moving prey and medium-sized fast moving prey. The experiment on the preferred size of prey indicated small beetles and small caterpillars as favoured by Calomera littoralis, while Cicindela hybrida preferred medium-sized fast moving prey and large caterpillars. DISCUSSION: The hunting behaviour of Calomera littoralis and Cicindela hybrida is complicated and includes a number of phases allowing to locate, capture and kill the prey. Beetles are able to discriminate between different types of prey and apply different behavioural tactics to hunt it. As the particular strategies are used to increase hunting success, and as a result allow to accumulate energy for future activity of the predator, it can be expected that such a type of hunting behaviour is characteristic also of other tiger beetle species.

14.
PeerJ ; 6: e5576, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30280016

RESUMO

BACKGROUND: Polyploid specimens are usually characterized by greater exuberance: they reach larger sizes and/or have a larger number of some organs. Festuca amethystina L. belongs to the section Aulaxyper. Based on morphological features, four subspecies of F. amethystina have been already identified. On the other hand, it has two cytotypes: diploid and tetraploid. The main aim of our study was to distinguish morphological differences between the cytotypes of F. amethystina, assuming that its phenotype differs significantly. METHODS: The nuclear DNA content was measured by flow cytometry in dry leaves from specimens originating from 13 populations of F. amethystina. Several macrometric and micrometric traits of stems, spikelets and leaf blades were taken into account in the comparative analysis of two cytotypes. RESULTS: In the case of cytotypes, specimens of tetraploids were larger than diploids. The conducted morphometric analysis of leaf cross-sections showed significant differences between the cytotypes. DISCUSSION: The research has confirmed for the first time that in the case of F. amethystina the principle of greater exuberance of polyploids is true. Differences between the cytotypes are statistically significant, however, they are not enough to make easy the distinction of cytotypes on the basis of the measurements themselves. Our findings favor the rule known in Festuca taxonomy as a whole, i.e. that the ploidy level can be one of the main classification criteria.

15.
Sci Rep ; 8(1): 8945, 2018 06 12.
Artigo em Inglês | MEDLINE | ID: mdl-29895884

RESUMO

Microsporidia are common parasites infecting animals and protists. They are specifically common pathogens of amphipods (Crustacea, Malacostraca), with Dictyocoela spp. being particularly frequent and highly prevalent, exhibiting a range of phenotypic and ecological effects. Until now, seven species of Dictyocoela were defined, predominantly based on the genetic distance. However, neither the taxonomic status of this provisionally erected genus (based on eight novel sequences and one micrograph of the spore), nor its internal phylogenetic relationships have been clearly revealed. The formal description of the genus and of most of the putative species are still lacking. Here we aimed to fill this gap and performed both ultrastructural and molecular studies (based on SSU, ITS and partial LSU) using different species delimitation methods. As a consensus of these results and following conservative data interpretation, we propose to distinguish five species infecting gammarid hosts, and to keep the names introduced by the authors of the type sequences: Dictyocoela duebenum, D. muelleri, D. berillonum and D. roeselum. We provide full descriptions of these species. Moreover, thanks to our extensive sampling, we extend the known host and geographic range of these Microsporidia.


Assuntos
Anfípodes/microbiologia , Microsporídios/fisiologia , Esporos Fúngicos/fisiologia , Animais , DNA Fúngico/química , DNA Fúngico/genética , Europa (Continente) , Geografia , Interações Hospedeiro-Parasita , Microscopia Eletrônica de Transmissão , Microsporídios/classificação , Microsporídios/genética , Filogenia , Análise de Sequência de DNA , Especificidade da Espécie , Esporos Fúngicos/genética , Esporos Fúngicos/ultraestrutura
16.
PeerJ ; 6: e5992, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-30595975

RESUMO

BACKGROUND: The process of apophytism or spreading native species to human-made habitats is one of the main elements in the creation of plant cover in anthropogenic areas. Lately, an increase of anthropogenic localities with valuable flora has been observed. Apophytes are also members of the family Orchidaceae, especially from the genus Epipactis. The aim of the study was to (i) determine and compare the phenotypic variation of E. helleborine (L.) Crantz plants in anthropogenic and natural habitats, (ii) compare the genome size of plants growing in natural and anthropogenic habitats. The results reported in this study may indicate that a habitat influences morphological characteristics of plant species. METHODS: Field studies were conducted on four native stands and four stands in anthropogenic areas of E. helleborine in Poland in years 2011-2013. Biometrical analyses were performed on shoots and flowers. The flowers were characterised by 25 biometric features and measured using a Nikon SMZ 800 binocular, microscopic Moticam-1SP cameras and the MIPlus07 programme (Conbest Co.). The nuclear DNA content was determined in fresh and young leaves of E. helleborine, collected from four natural and four anthropogenic populations. RESULTS: We observed that in anthropogenic populations: (i) shoots were higher than shoots from natural populations, (ii) flowers differed significantly in terms of ten biometric features between habitats, (iii) the genome size of some population differed significantly between plants growing in natural and anthropogenic habitats. DISCUSSION: According to some researchers, the presence of phenotypic variability and the occurrence of ecotypes are adaptation strategies of plants to environmental changes. In our opinion, in the case of the studied anthropogenic habitats (roadside) in which the E. helleborine populations grew, we can talk about ecofen due to the often repeated set of characteristic features, i.e., high shoots, long inflorescence and long, broad leaves. We agree, however, that it is difficult to isolate a taxonomic unit for ecofen due to the lack of experimental research.

17.
PeerJ ; 5: e3159, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28439457

RESUMO

BACKGROUND: Epipactis helleborine is an Eurasian orchid species which prefers woodland environments but it may also spontaneously and successfully colonise human-made artificial and disturbed habitats such as roadsides, town parks and gardens. It is suggested that orchids colonising anthropogenic habitats are characterised by a specific set of features (e.g., large plant size, fast flower production). However, as it is not well known how pollinator diversity and reproductive success of E. helleborine differs in populations in anthropogenic habitats compared to populations from natural habitats, we wanted to compare pollinator diversity and reproductive success of this orchid species between natural and anthropogenic habitat types. METHODS: Pollination biology, reproductive success and autogamy in populations of E. helleborine from anthropogenic (roadside) and natural (forest) habitats were compared. Eight populations (four natural and four human-disturbed ones) in two seasons were studied according to height of plants, length of inflorescences, as well as numbers of juvenile shoots, flowering shoots, flowers, and fruits. The number and diversity of insect pollinators were studied in one natural and two human-disturbed populations. RESULTS: Reproductive success (the ratio of the number of flowers to the number of fruits) in the populations from anthropogenic habitats was significantly higher than in the natural habitats. Moreover, plants from anthropogenic habitats were larger than those from natural ones. In both types of populations, the main insect pollinators were Syrphidae, Culicidae, Vespidae, Apidae and Formicidae. With respect to the type of pollinators' mouth-parts, chewing (39%), sponging (34%) and chewing-sucking (20%) pollinators prevailed in anthropogenic habitats. In natural habitats, pollinators with sponging (55%) and chewing mouth-parts (32%) dominated, while chewing-sucking and piercing-sucking insects accounted for 9% and 4% respectively. DISCUSSION: We suggest that higher reproductive success of E. helleborine in the populations from anthropogenic habitats than in the populations from natural habitats may result from a higher number of visits by pollinators and their greater species diversity, but also from the larger size of plants growing in such habitats. Moreover, our data clearly show that E. helleborine is an opportunistic species with respect to pollinators, with a wide spectrum of pollinating insects. Summarising, E. helleborine is a rare example of orchid species whose current range is not declining. Its ability to make use of anthropogenically altered habitats has allowed its significant spatial range expansion, and even successful colonisation of North America.

18.
PeerJ ; 5: e3016, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28265503

RESUMO

BACKGROUND: The Balkans are a major worldwide biodiversity and endemism hotspot. Among the freshwater biota, amphipods are known for their high cryptic diversity. However, little is known about the temporal and paleogeographic aspects of their evolutionary history. We used paleogeography as a framework for understanding the onset of diversification in Gammarus roeselii: (1) we hypothesised that, given the high number of isolated waterbodies in the Balkans, the species is characterised by high level of cryptic diversity, even on a local scale; (2) the long geological history of the region might promote pre-Pleistocene divergence between lineages; (3) given that G. roeselii thrives both in lakes and rivers, its evolutionary history could be linked to the Balkan Neogene paleolake system; (4) we inspected whether the Pleistocene decline of hydrological networks could have any impact on the diversification of G. roeselii. MATERIAL AND METHODS: DNA was extracted from 177 individuals collected from 26 sites all over Balkans. All individuals were amplified for ca. 650 bp long fragment of the mtDNA cytochrome oxidase subunit I (COI). After defining molecular operational taxonomic units (MOTU) based on COI, 50 individuals were amplified for ca. 900 bp long fragment of the nuclear 28S rDNA. Molecular diversity, divergence, differentiation and historical demography based on COI sequences were estimated for each MOTU. The relative frequency, geographic distribution and molecular divergence between COI haplotypes were presented as a median-joining network. COI was used also to reconstruct time-calibrated phylogeny with Bayesian inference. Probabilities of ancestors' occurrence in riverine or lacustrine habitats, as well their possible geographic locations, were estimated with the Bayesian method. A Neighbour Joining tree was constructed to illustrate the phylogenetic relationships between 28S rDNA haplotypes. RESULTS: We revealed that G. roeselii includes at least 13 cryptic species or molecular operational taxonomic units (MOTUs), mostly of Miocene origin. A substantial Pleistocene diversification within-MOTUs was observed in several cases. We evidenced secondary contacts between very divergent MOTUs and introgression of nDNA. The Miocene ancestors could live in either lacustrine or riverine habitats yet their presumed geographic localisations overlapped with those of the Neogene lakes. Several extant riverine populations had Pleistocene lacustrine ancestors. DISCUSSION: Neogene divergence of lineages resulting in substantial cryptic diversity may be a common phenomenon in extant freshwater benthic crustaceans occupying areas that were not glaciated during the Pleistocene. Evolution of G. roeselii could be associated with gradual deterioration of the paleolakes. The within-MOTU diversification might be driven by fragmentation of river systems during the Pleistocene. Extant ancient lakes could serve as local microrefugia during that time.

19.
PeerJ ; 4: e2128, 2016.
Artigo em Inglês | MEDLINE | ID: mdl-27547517

RESUMO

Background. Calomera littoralis is a Palearctic species, widely distributed in Europe; inhabiting predominantly its Atlantic, Mediterranean and Black Sea coastlines. Methods. Its phylogeography on the Balkan Peninsula and on the north-western Black Sea coast was inferred using a 697 bp long portion of the mitochondrial COI gene, amplified from 169 individuals collected on 43 localities. Results. The results revealed two genetically divergent groups/lineages, the southern one inhabiting both the Balkan Peninsula and the Pontic Region and the northern one found exclusively in the Pontic Region. Species delimitation based on DNA barcoding gap suggested an interspecific level of divergence between these groups. Multivariate analysis of eight male and female morphometric traits detected no difference between the groups, implying they may represent cryptic species. The Bayesian time-calibrated reconstruction of phylogeny suggested that the lineages diverged ca. 2.3 Ma, in early Pleistocene. Discussion. The presence of the two genetically divergent groups results most likely from contemporary isolation of the Pontic basin from the Mediterranean that broke the continuous strip of coastal habitats inhabited by C. littoralis. Demographic analyses indicated that both lineages have been in demographic and spatial expansion since ca. 0.15 Ma. It coincides with the terminal stage of MIS-6, i.e., Wartanian/Saalian glaciation, and beginning of MIS-5e, i.e., Eemian interglacial, during which, due to eustatic sea level rise, a wide connection between Mediterranean and the Pontic basin was re-established. This, along with re-appearance of coastal habitats could initiate north-east expansion of the southern lineage and its secondary contact with the northern one. The isolation of the Pontic basin from the Mediterranean during the Weichselian glaciation most likely did not have any effect on their phylogeography.

20.
Zookeys ; (513): 143-60, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26257573

RESUMO

We present a review of the etymology of zoological taxonomic names with emphasis on the most unusual examples. The names were divided into several categories, starting from the most common - given after morphological features - through inspiration from mythology, legends, and classic literature but also from fictional and nonfictional pop-culture characters (e.g., music, movies or cartoons), science, and politics. A separate category includes zoological names created using word-play and figures of speech such as tautonyms, acronyms, anagrams, and palindromes. Our intention was to give an overview of possibilities of how and where taxonomists can find the inspirations that will be consistent with the ICZN rules and generate more detail afterthought about the naming process itself, the meaningful character of naming, as well as the recognition and understanding of names.

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